Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1631

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1630: 9998 - SUPERFAMILY--SSF81383, at 756759 to 757602 9998 mRNA_1631: 9999 - BLAST Tyrosine-protein phosphatase non-receptor type 23 [St..., at 757960 to 758498 9999

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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756,985 - 9998 mRNA_1630 0.27 0.0
757,006 - 9998 mRNA_1630 0.29 0.6
757,018 - 9998 mRNA_1630 0.31 2.2
757,266 + 9998 mRNA_1630 0.60 2.1
757,447 + 9998 mRNA_1630 0.82 -0.8
757,583 + -1.3
757,588 + 0.4
757,721 + 0.5
757,732 + 0.1
757,740 - 0.3
757,741 + -0.7
757,773 + 1.1
757,803 - 1.5
757,811 - 2.3
757,856 + -0.8
757,858 - 0.6
757,865 - 1.2
757,867 + -0.8
757,872 + 3.0
757,880 - -0.3
757,886 + 0.8
757,921 + 2.4
757,993 + -0.9
758,198 + 9999 mRNA_1631 0.44 0.4
758,206 + 9999 mRNA_1631 0.46 -1.0
758,530 + 0.6
758,574 + 0.1
758,748 - 0.5
758,816 + 0.5
758,822 - 1.3
758,835 + 0.5
758,905 + 0.7
758,906 + -0.1
758,927 + 0.4
758,932 - 1.5
758,934 - 0.9
758,943 + 1.7
758,944 + -1.6
759,158 + 3.1
759,159 - 1.2
759,175 - -0.7
759,178 - 1.0
759,184 - 1.3
759,186 - 0.8
759,188 - 0.4
759,193 - 0.9
759,197 - 0.3
759,203 + 0.1