Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1627

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1626: 9994 - Hypothetical Protein, at 750796 to 751505 9994 mRNA_1627: 9995 - K18551 SDT1 pyrimidine and pyridine-specific 5'-nucleotidase, at 751734 to 753010 9995 mRNA_1628: 9996 - Hypothetical Protein, at 753218 to 753980 9996

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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750,797 - 1.1
750,825 + -0.8
750,992 - 9994 mRNA_1626 0.28 -0.8
750,993 + 9994 mRNA_1626 0.28 0.5
751,044 + 9994 mRNA_1626 0.35 -0.4
751,155 + 9994 mRNA_1626 0.51 0.0
751,328 + 9994 mRNA_1626 0.75 1.2
751,597 - 0.3
751,614 + 1.1
752,068 + 9995 mRNA_1627 0.26 2.5
752,287 - 9995 mRNA_1627 0.43 -0.8
753,045 + 0.8
753,046 - -0.2
753,203 + 0.2
753,207 + 1.7
753,218 + 0.9
753,219 - 0.6
753,236 - 1.8
753,507 + 9996 mRNA_1628 0.38 0.3
753,819 - 9996 mRNA_1628 0.79 0.1