Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1622

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1621: 9989 - Hypothetical Protein, at 741895 to 743431 9989 mRNA_1622: 9990 - K17738 ARD D-arabinitol 2-dehydrogenase, at 743761 to 745808 9990 mRNA_1623: 9991 - Hypothetical Protein, at 746291 to 747597 9991

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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742,923 + 9989 mRNA_1621 0.67 0.3
743,027 - 9989 mRNA_1621 0.74 3.3
743,070 - 9989 mRNA_1621 0.76 0.2
743,397 + 2.5
743,677 + 1.3
744,956 + 9990 mRNA_1622 0.58 0.7
745,093 + 9990 mRNA_1622 0.65 2.6
745,113 - 9990 mRNA_1622 0.66 -3.4
745,114 + 9990 mRNA_1622 0.66 -0.3
745,142 + 9990 mRNA_1622 0.67 -0.1
745,156 - 9990 mRNA_1622 0.68 -0.0
745,172 + 9990 mRNA_1622 0.69 0.3
745,192 - 9990 mRNA_1622 0.70 -0.7
745,307 - 9990 mRNA_1622 0.75 -0.3
745,580 + 9990 mRNA_1622 0.89 0.8
745,601 + 9990 mRNA_1622 0.90 -0.6
745,701 - 0.9
745,747 - 1.8
745,749 + 0.9
745,750 - -1.8
745,751 + 0.6
745,754 + 1.1
745,757 + 1.1
745,759 - -0.8
745,771 - 1.1
745,771 - 1.2
745,793 + -0.6
745,804 - -0.5
745,832 - -0.4
745,837 + -0.6
745,922 + -0.5
745,995 + 0.5
746,010 - 0.8
746,018 + 1.5
746,179 + 2.0
746,478 - 9991 mRNA_1623 0.14 -1.3