Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1613

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1612: 9980 - Hypothetical Protein, at 717528 to 719368 9980 mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719549 to 722839 9981 mRNA_1614: 9982 - KOG2819 Uncharacterized conserved protein, at 722930 to 724798 9982

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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718,812 + 9980 mRNA_1612 0.70 -0.4
718,897 + 9980 mRNA_1612 0.74 -0.3
719,049 + 9980 mRNA_1612 0.83 -1.2
719,052 - 9980 mRNA_1612 0.83 -2.0
719,073 + 9980 mRNA_1612 0.84 -0.3
719,100 + 9980 mRNA_1612 0.85 1.5
719,203 + -1.4
719,507 + 0.8
719,581 - -2.2
720,237 - 9981 mRNA_1613 0.21 3.9
720,412 + 9981 mRNA_1613 0.26 -0.8
720,516 + 9981 mRNA_1613 0.29 1.2
720,530 - 9981 mRNA_1613 0.30 1.5
720,665 - 9981 mRNA_1613 0.34 -0.4
720,964 + 9981 mRNA_1613 0.43 0.6
721,296 + 9981 mRNA_1613 0.53 2.0
721,551 - 9981 mRNA_1613 0.61 0.2
721,853 - 9981 mRNA_1613 0.70 1.4
722,132 - 9981 mRNA_1613 0.78 0.6
722,273 - 9981 mRNA_1613 0.83 0.0
722,605 - -0.2
722,743 + 1.8
722,884 + 0.5
723,005 - 1.3
723,025 + 0.9
723,030 - 1.6
723,033 + -0.5
723,127 + 9982 mRNA_1614 0.11 0.2
723,176 - 9982 mRNA_1614 0.13 -2.3