Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1593

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1593: 9961 - KOG4366 Predicted thioesterase, at 678647 to 679781 9961

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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677,801 + 0.2
678,370 - 0.4
678,513 + 0.0
678,535 - 0.8
678,541 + -1.1
678,550 - -0.6
678,560 + 0.0
678,571 - 0.4
678,583 + -0.3
678,588 + -0.7
678,706 + 1.9
678,712 + 1.5
678,726 + -1.0
678,726 + 0.4
678,732 + -0.2
678,732 + -0.3
678,790 + 9961 mRNA_1593 0.13 -0.5
678,879 + 9961 mRNA_1593 0.20 0.7
679,017 + 9961 mRNA_1593 0.33 0.6
679,321 + 9961 mRNA_1593 0.59 0.3
679,456 - 9961 mRNA_1593 0.71 1.5
679,765 + -0.2
679,770 - -0.1
679,772 + 0.6
679,776 + -0.5
679,864 - 0.7
679,874 - -2.3
679,944 + 0.1
679,977 - -0.2
680,012 - -0.3
680,013 + -0.2
680,015 + -2.4
680,026 + -0.6
680,033 - 1.4
680,033 - -1.6
680,038 + 0.3
680,041 + -0.5
680,045 - -1.7
680,048 - -0.1
680,052 + 0.1
680,064 + -0.0
680,126 + 0.3
680,136 - -0.1
680,136 - -0.3
680,137 + -0.8
680,137 - -0.3
680,147 + 0.1
680,208 - -0.2
680,245 - -1.5
680,280 - -0.6
680,297 - 1.5
680,308 - 1.6
680,310 - -0.9
680,310 - 2.1
680,317 - 0.7
680,321 + 2.1
680,327 + -0.3
680,357 - -0.2
680,369 + 1.6
680,377 + -1.2
680,395 + 1.8
680,405 - 0.3
680,423 - -0.4
680,454 + 1.4
680,460 + 0.9
680,486 - -1.0
680,493 - -0.1
680,529 + 0.5