Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1545

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1544: 9912 - K08745 SLC27A1_4, FATP1, FATP4 solute carrier family 27 (fatty acid transporter), member 1/4, at 555337 to 558196 9912 mRNA_1545: 9913 - Hypothetical Protein, at 558416 to 558832 9913 mRNA_1546: 9914 - K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23, at 559318 to 562481 9914

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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557,460 - 9912 mRNA_1544 0.74 -0.7
557,461 + 9912 mRNA_1544 0.74 -0.1
557,681 - 9912 mRNA_1544 0.82 -0.5
558,268 + 0.7
558,332 - -1.2
558,349 + 1.8
558,350 - 1.0
558,483 + 9913 mRNA_1545 0.16 -1.9
558,509 - 9913 mRNA_1545 0.22 -1.2
558,648 + 9913 mRNA_1545 0.56 1.0
558,781 + 9913 mRNA_1545 0.88 0.5
558,928 + 0.9
559,080 + 0.7
559,088 + 0.7
559,144 - 0.6
559,216 + 0.2
559,242 - -0.2
559,347 - 2.0
559,365 - -0.6
559,391 - -0.4
559,674 + 9914 mRNA_1546 0.11 0.0