Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1494

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1494: 9862 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 443115 to 444117 9862 mRNA_1495: 9863 - Hypothetical Protein, at 444439 to 447391 9863

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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442,150 - -0.2
442,206 + 0.0
442,233 + 0.0
442,281 - 0.4
442,342 + 0.3
442,435 - 0.4
442,725 + 2.3
442,741 + 1.9
442,750 - -0.1
442,892 + -0.3
443,007 - 2.6
443,013 - 1.4
443,017 - 1.3
443,017 - -0.6
443,022 + 1.4
443,024 + 0.5
443,027 - -0.1
443,033 + -0.7
443,037 + -0.2
443,040 - -0.5
443,048 + 0.3
443,053 - -0.6
443,149 - 1.7
443,193 + 0.5
443,604 - 9862 mRNA_1494 0.49 -0.7
443,886 + 9862 mRNA_1494 0.77 1.2
443,915 + 9862 mRNA_1494 0.80 1.5
444,173 - 1.3
444,315 + 0.6
444,320 - -1.2
444,329 + 1.2
444,344 - 1.7
444,451 - -0.3
444,457 + 1.7
444,491 - 0.3
444,495 - 0.8
444,496 + 1.7
444,501 - -0.1
444,632 - -0.4
444,777 - 9863 mRNA_1495 0.11 1.6
444,931 - 9863 mRNA_1495 0.17 -0.1
444,932 - 9863 mRNA_1495 0.17 0.3