Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1457

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1456: 9824 - Hypothetical Protein, at 334621 to 335519 9824 mRNA_1457: 9825 - K00549 metE 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, at 336305 to 339274 9825 mRNA_1458: 9826 - K17775 MDM34, MMM2 mitochondrial distribution and morphology protein 34, at 339999 to 342727 9826

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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335,522 + 0.4
335,672 - 0.9
335,776 + 3.0
335,805 - -0.6
335,830 - 0.8
335,965 - 0.1
336,096 + 2.0
336,098 + 2.1
336,155 - -0.1
336,158 + 0.9
336,217 - -1.1
336,261 - 0.7
336,731 - 9825 mRNA_1457 0.14 -0.3
336,808 + 9825 mRNA_1457 0.17 -1.3
336,980 - 9825 mRNA_1457 0.23 -1.3
337,143 - 9825 mRNA_1457 0.28 -1.5
337,430 + 9825 mRNA_1457 0.38 -1.1
337,721 - 9825 mRNA_1457 0.48 0.1
337,742 + 9825 mRNA_1457 0.48 -0.6
339,024 + 2.4
339,287 + 2.6
339,288 + 0.7
339,292 - 0.0
339,307 - -0.8
339,425 - -0.4
339,444 - -0.5
339,466 - 0.4
339,471 - -1.6
339,471 - -0.1
339,471 - 0.6
339,473 - 1.9
339,473 - 1.0
339,474 + 0.6
339,477 + -0.7
339,481 + -0.8
339,483 + 1.3
339,485 + -0.5
339,488 - -0.4
339,490 + -0.0
339,494 - 0.5
339,495 + -0.2
339,496 - 1.6
339,594 - -2.0
339,623 + -2.0
339,670 - 0.0
339,672 - 0.3
339,679 + 0.7
339,681 + 0.7
339,777 - -0.1
339,788 - 1.3
339,795 + 0.7
339,808 - 0.4
339,811 - 0.4
339,815 - 0.2
339,822 + -0.8
339,979 + -1.3