Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1434

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1433: 9801 - K17081 PHB2 prohibitin 2, at 269247 to 270588 9801 mRNA_1434: 9802 - Hypothetical Protein, at 270891 to 274299 9802 mRNA_1435: 9803 - Hypothetical Protein, at 274509 to 275627 9803

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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269,894 - 9801 mRNA_1433 0.48 0.8
270,162 - 9801 mRNA_1433 0.68 -0.0
270,328 + 9801 mRNA_1433 0.81 0.5
270,330 - 9801 mRNA_1433 0.81 2.0
270,333 + 9801 mRNA_1433 0.81 0.6
270,390 + 9801 mRNA_1433 0.85 -0.4
270,484 + -0.4
270,497 + 0.7
270,644 + -0.2
270,650 - 2.0
270,774 - -0.6
270,778 + 0.0
270,927 + 0.4
270,930 + 2.2
270,930 + 1.1
271,071 - -0.1
271,090 - -2.0
271,227 - 0.7
271,994 - 9802 mRNA_1434 0.32 -1.6
272,264 + 9802 mRNA_1434 0.40 -0.8
272,379 - 9802 mRNA_1434 0.44 0.1
272,538 - 9802 mRNA_1434 0.48 0.5
272,543 + 9802 mRNA_1434 0.48 0.4
272,796 + 9802 mRNA_1434 0.56 1.0
272,829 - 9802 mRNA_1434 0.57 0.6
273,017 - 9802 mRNA_1434 0.62 1.4
273,252 - 9802 mRNA_1434 0.69 1.2
273,860 - 9802 mRNA_1434 0.87 0.6
274,360 + -0.8
274,903 - 9803 mRNA_1435 0.35 -2.7
275,258 + 9803 mRNA_1435 0.67 -0.3