Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1406

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1406: 9774 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 195890 to 197396 9774

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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195,108 + -0.7
195,111 - 0.5
195,246 - 3.0
195,263 - 1.8
195,408 + -1.5
195,437 - -1.3
195,446 + 0.3
195,447 + 1.6
195,448 - -1.1
195,454 + -0.4
195,458 - -0.2
195,470 + 0.4
195,471 + -0.5
195,476 + 1.4
195,487 - 2.8
195,487 - -1.5
195,489 - -0.2
195,491 - -1.3
195,497 + 1.0
195,507 + 1.3
195,510 - 2.8
195,512 + 0.7
195,522 - 3.8
195,529 - 1.6
195,535 + -1.7
195,539 + 0.1
195,543 + 0.2
195,551 + -2.2
195,554 - 0.9
195,554 - 1.3
195,554 - 3.3
195,555 + 0.5
195,571 + 0.1
195,575 + 0.5
195,584 + 1.1
195,591 - -0.1
195,591 - 0.0
195,623 + 0.8
195,636 - 2.1
195,636 - 1.8
195,742 - 0.9
195,760 + 0.1
195,796 - 0.9
195,884 - -1.7
196,009 - 0.1
196,201 - 9774 mRNA_1406 0.21 -0.1
196,212 + 9774 mRNA_1406 0.21 -1.1
196,219 - 9774 mRNA_1406 0.22 -0.5
196,368 + 9774 mRNA_1406 0.32 1.6
196,382 - 9774 mRNA_1406 0.33 0.1
196,499 + 9774 mRNA_1406 0.40 0.7
196,602 + 9774 mRNA_1406 0.47 1.5
196,649 - 9774 mRNA_1406 0.50 1.6
196,768 - 9774 mRNA_1406 0.58 -0.3
197,073 + 9774 mRNA_1406 0.79 0.9
197,228 + 9774 mRNA_1406 0.89 0.8
197,349 - -0.1
197,497 - 1.1
197,509 - 1.4
198,111 - -0.5
198,275 + -1.1