Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1385

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1384: 9752 - KOG4472 Glycolipid 2-alpha-mannosyltransferase (alpha-1,2-mannosyltransferase), at 143801 to 145438 9752 mRNA_1385: 9753 - K06966 K06966 uncharacterized protein, at 145892 to 146941 9753 mRNA_1386: 9754 - K06966 K06966 uncharacterized protein, at 147599 to 148550 9754

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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145,281 - 1.3
145,344 + 0.7
145,463 + 0.3
145,587 + -1.5
145,601 - -0.9
145,605 - 0.4
145,609 + 0.7
145,744 + 1.5
145,748 - -0.3
145,769 + 1.3
145,887 - -0.9
145,896 + 0.2
146,026 - 9753 mRNA_1385 0.13 0.2
146,077 - 9753 mRNA_1385 0.18 1.7
146,475 - 9753 mRNA_1385 0.56 0.7
146,618 - 9753 mRNA_1385 0.69 0.3
146,748 - 9753 mRNA_1385 0.82 0.0
146,924 - 3.2
146,958 + 0.3
147,043 - 0.4
147,053 - -0.3
147,074 + 1.6
147,512 - 0.9
147,657 - 3.0
147,674 + 0.6