Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1370

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1369: 9737 - HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF52833, at 111145 to 112135 9737 mRNA_1370: 9738 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 112389 to 113571 9738 mRNA_1371: 9739 - KOG3024 Uncharacterized conserved protein, at 114058 to 115447 9739

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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111,588 + 9737 mRNA_1369 0.45 -0.0
111,749 + 9737 mRNA_1369 0.61 3.3
111,770 + 9737 mRNA_1369 0.63 0.1
112,070 - 2.4
112,173 + -0.1
112,239 + 1.6
112,666 + 9738 mRNA_1370 0.23 -0.1
112,715 - 9738 mRNA_1370 0.28 0.8
112,812 - 9738 mRNA_1370 0.36 -0.7
112,914 - 9738 mRNA_1370 0.44 0.8
112,934 + 9738 mRNA_1370 0.46 1.3
112,949 + 9738 mRNA_1370 0.47 0.9
113,065 + 9738 mRNA_1370 0.57 -0.8
113,072 - 9738 mRNA_1370 0.58 0.0
113,181 - 9738 mRNA_1370 0.67 1.0
113,369 + 9738 mRNA_1370 0.83 -0.0
113,492 + -0.7
113,508 + 1.8
113,631 - 0.6
113,636 - -1.2
113,637 - 0.8
113,744 - -1.5
113,944 + 0.0
113,945 - 0.2
113,949 - 0.8
114,220 - 9739 mRNA_1371 0.12 0.6
114,248 + 9739 mRNA_1371 0.14 0.5