Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1359

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1359: 9727 - K06018 PPN1 endopolyphosphatase, at 85771 to 88302 9727 mRNA_1360: 9728 - K01054 MGLL acylglycerol lipase, at 88622 to 90157 9728

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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84,835 - 0.2
84,864 - 1.3
84,865 + 0.3
84,873 + -0.1
84,898 + -0.5
84,902 + 1.4
84,921 + 0.1
84,922 + 0.5
84,923 + 0.2
84,925 - 1.8
84,925 - 0.4
84,934 + 3.5
84,942 - -1.2
85,049 - -0.7
85,051 - 0.1
85,060 - -0.4
85,064 + 0.3
85,087 - -0.7
85,197 - 0.8
85,217 - 0.7
85,217 + 2.2
85,223 + 0.8
85,341 - 0.2
85,358 + 0.2
85,363 - 1.0
85,363 + 1.1
85,369 + 0.1
85,375 - 1.0
85,375 + 1.4
85,376 - -0.3
85,377 + -0.7
85,388 - -0.9
85,399 - 0.2
85,399 + 1.5
85,403 - -1.7
85,404 + -0.3
85,570 - 2.4
85,584 + 1.8
85,602 + -0.2
85,682 + 0.6
85,867 + 0.5
85,873 + -0.4
86,755 + 9727 mRNA_1359 0.39 0.4
86,836 - 9727 mRNA_1359 0.42 -0.4
87,112 + 9727 mRNA_1359 0.53 -0.0
87,145 - 9727 mRNA_1359 0.54 -1.5
87,215 + 9727 mRNA_1359 0.57 -1.2
87,566 + 9727 mRNA_1359 0.71 -0.1
87,587 - 9727 mRNA_1359 0.72 2.6
87,713 - 9727 mRNA_1359 0.77 1.3
87,736 + 9727 mRNA_1359 0.78 1.4
87,769 + 9727 mRNA_1359 0.79 0.9
88,292 + 2.2
88,298 - 1.3
88,415 - 0.4
88,416 + 0.8
88,434 - -1.4
88,457 - 0.6
88,468 + 3.0
88,568 - -1.9
88,576 - 0.4
88,585 - -0.1
88,603 + 0.4
88,604 - 0.1
88,727 + 0.0
88,736 - 2.0
89,033 - 9728 mRNA_1360 0.27 0.2
89,050 - 9728 mRNA_1360 0.28 0.9