Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1328

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695 mRNA_1328: 9696 - SUPERFAMILY--SSF82708, at 5867 to 7721 9696 mRNA_1329: 9697 - HMMPfam-SUZ domain-PF12752,ProSiteProfiles-SUZ domain profile.-PS51673, at 8055 to 8960 9697

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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4,938 + 9695 mRNA_1327 0.80 1.8
5,367 - 1.8
5,399 - 0.6
5,655 - -0.7
5,846 + -0.4
5,952 - 0.4
6,136 + 9696 mRNA_1328 0.15 0.1
6,296 - 9696 mRNA_1328 0.23 0.0
6,297 + 9696 mRNA_1328 0.23 0.0
6,319 + 9696 mRNA_1328 0.24 3.0
6,399 - 9696 mRNA_1328 0.29 -0.5
6,430 - 9696 mRNA_1328 0.30 -0.9
6,442 + 9696 mRNA_1328 0.31 1.4
6,445 - 9696 mRNA_1328 0.31 1.3
6,699 + 9696 mRNA_1328 0.45 0.6
7,004 - 9696 mRNA_1328 0.61 -0.0
7,319 - 9696 mRNA_1328 0.78 -1.1
7,321 + 9696 mRNA_1328 0.78 0.3
7,459 - 9696 mRNA_1328 0.86 -0.2
7,532 - 9696 mRNA_1328 0.90 1.3
7,702 - 1.6
7,712 - -0.4
7,723 - 0.4
7,723 - 1.3
7,740 + 0.0
7,796 + -1.0
7,851 + -0.6
7,936 - 0.6
7,968 + -0.5
7,968 - 0.9
7,976 - 2.9
8,393 - 9697 mRNA_1329 0.37 0.5
8,402 - 9697 mRNA_1329 0.38 0.9
8,435 - 9697 mRNA_1329 0.42 -0.4
8,577 + 9697 mRNA_1329 0.58 -2.2
8,599 + 9697 mRNA_1329 0.60 -0.3
8,603 + 9697 mRNA_1329 0.60 0.2
8,708 + 9697 mRNA_1329 0.72 -0.0