Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1247

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1246: 9614 - SUPERFAMILY--SSF52047, at 743488 to 744876 9614 mRNA_1247: 9615 - Hypothetical Protein, at 745328 to 746839 9615 mRNA_1248: 9616 - KOG1289 Amino acid transporters, at 747049 to 750301 9616

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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744,375 + 9614 mRNA_1246 0.64 -1.9
744,488 + 9614 mRNA_1246 0.72 0.5
744,505 - 9614 mRNA_1246 0.73 -1.5
744,790 + 1.0
745,087 + 1.1
745,094 + 0.5
745,098 + -0.0
745,100 - 0.4
745,810 + 9615 mRNA_1247 0.32 0.0
745,840 + 9615 mRNA_1247 0.34 -0.5
745,978 + 9615 mRNA_1247 0.43 0.0
746,143 + 9615 mRNA_1247 0.54 1.0
746,257 + 9615 mRNA_1247 0.61 0.0
746,341 - 9615 mRNA_1247 0.67 1.0
746,380 + 9615 mRNA_1247 0.70 -2.3
746,521 + 9615 mRNA_1247 0.79 1.4
746,831 - 3.6
747,123 + -2.5
747,147 + 2.0
747,251 + -0.6
747,491 - 9616 mRNA_1248 0.14 -0.3
747,560 + 9616 mRNA_1248 0.16 0.0
747,573 + 9616 mRNA_1248 0.16 -0.2
747,694 + 9616 mRNA_1248 0.20 -0.1
747,702 + 9616 mRNA_1248 0.20 1.3
747,732 + 9616 mRNA_1248 0.21 -2.0
747,839 + 9616 mRNA_1248 0.24 1.1