Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1237

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1236: 9604 - K02377 TSTA3, fcl GDP-L-fucose synthase, at 722261 to 724161 9604 mRNA_1237: 9605 - SUPERFAMILY--SSF52047, at 724433 to 725551 9605 mRNA_1238: 9606 - SUPERFAMILY--SSF52047, at 726176 to 728961 9606

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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724,220 - 0.7
724,390 - 0.1
724,421 - 2.2
724,700 - 9605 mRNA_1237 0.24 -0.2
724,708 + 9605 mRNA_1237 0.25 -0.1
724,710 - 9605 mRNA_1237 0.25 1.5
724,719 + 9605 mRNA_1237 0.26 -0.8
724,797 + 9605 mRNA_1237 0.33 0.8
724,809 + 9605 mRNA_1237 0.34 0.6
724,816 + 9605 mRNA_1237 0.34 -1.0
724,817 - 9605 mRNA_1237 0.34 -0.1
725,009 + 9605 mRNA_1237 0.51 0.8
725,143 + 9605 mRNA_1237 0.63 1.5
725,492 + 1.7
725,698 - -0.0
725,715 + 0.6
725,715 - -0.7
725,750 - 0.9
725,752 - -0.6
725,753 - 4.2
725,771 + -0.3
725,877 + 0.6
726,057 + -0.0
726,077 - 1.5
726,206 - 0.6
726,208 - 0.6
726,218 - 2.9
726,345 - -0.2
726,386 + -0.3
726,406 - -0.8