Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1229

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1228: 9596 - K00693 GYS glycogen synthase, at 699587 to 703104 9596 mRNA_1229: 9597 - SUPERFAMILY--SSF52047, at 703452 to 704884 9597

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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702,763 - 1.6
702,787 + -0.4
703,072 - -0.1
703,125 - 1.1
703,323 + -1.3
703,326 - -0.5
703,650 - 9597 mRNA_1229 0.14 -0.2
704,070 + 9597 mRNA_1229 0.43 0.7
704,396 + 9597 mRNA_1229 0.66 -1.7
704,517 - 9597 mRNA_1229 0.74 -0.3
704,526 + 9597 mRNA_1229 0.75 -0.3
704,535 - 9597 mRNA_1229 0.76 -0.6
704,566 - 9597 mRNA_1229 0.78 2.1
704,569 + 9597 mRNA_1229 0.78 0.8
704,594 + 9597 mRNA_1229 0.80 0.3
704,810 - -0.0
705,134 - -0.4
705,537 + 0.6
705,538 + -0.2
705,550 + 1.1
705,832 - -0.5
705,839 - 1.3
705,872 - 0.3
705,873 + 0.3
705,879 - 0.2