Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1226

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1225: 9593 - KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain, at 691442 to 693362 9593 mRNA_1226: 9594 - K01262 pepP Xaa-Pro aminopeptidase, at 693784 to 696236 9594 mRNA_1227: 9595 - KOG1318 Helix loop helix transcription factor EB, at 696629 to 699042 9595

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
693,224 + -0.4
693,390 + 0.7
693,395 - 0.1
693,521 - 0.3
693,523 + 0.3
693,587 + -1.6
693,710 + 0.6
693,815 - 0.1
694,254 - 9594 mRNA_1226 0.19 -1.3
694,281 + 9594 mRNA_1226 0.20 0.4
694,346 + 9594 mRNA_1226 0.23 0.9
694,829 - 9594 mRNA_1226 0.43 -0.3
694,889 + 9594 mRNA_1226 0.45 0.2
695,421 - 9594 mRNA_1226 0.67 0.3
695,730 - 9594 mRNA_1226 0.79 2.1
696,201 - 0.5
696,304 + 2.5
696,348 - 2.4
696,602 - 2.0
696,809 + -1.7
696,818 - 0.0
696,940 - 9595 mRNA_1227 0.13 0.8
696,948 + 9595 mRNA_1227 0.13 1.8
696,965 + 9595 mRNA_1227 0.14 3.2
697,024 - 9595 mRNA_1227 0.16 -0.2