Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1213

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1212: 9580 - HMMPfam-Regulator of G protein signaling domain-PF00615,ProSiteProfiles-RGS domain profile.-PS50132,SMART-Regulator of G protein signalling domain-SM00315,SUPERFAMILY--SSF48097, at 663108 to 664692 9580 mRNA_1213: 9581 - KOG1205 Predicted dehydrogenase, at 665089 to 665972 9581 mRNA_1214: 9582 - Hypothetical Protein, at 666244 to 666423 9582 mRNA_1215: 9583 - Hypothetical Protein, at 666772 to 668801 9583

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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665,442 - 9581 mRNA_1213 0.40 1.6
665,448 + 9581 mRNA_1213 0.41 2.6
666,040 + -0.1
666,162 + 0.0
666,187 - -0.6
666,309 - 9582 mRNA_1214 0.36 -1.1
666,450 - -0.6