Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1181

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1180: 9548 - Hypothetical Protein, at 587058 to 592378 9548 mRNA_1181: 9549 - Hypothetical Protein, at 592662 to 593327 9549 mRNA_1182: 9550 - K12816 CDC40, PRP17 pre-mRNA-processing factor 17, at 593740 to 596442 9550

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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591,715 - 9548 mRNA_1180 0.88 0.5
591,791 + 9548 mRNA_1180 0.89 1.5
591,922 - -0.2
591,923 + 1.0
591,934 - 0.5
592,120 + 1.8
592,121 + 0.3
592,124 - 0.7
592,209 + -0.5
592,228 + 0.3
592,284 + 0.4
592,287 - 0.1
592,289 + 1.7
592,653 + 1.5
592,702 - 1.3
592,835 - 9549 mRNA_1181 0.26 0.5
593,119 - 9549 mRNA_1181 0.69 -3.0
593,361 + -1.1
593,438 + 1.8
593,517 - -1.2
593,520 - -0.5
593,526 - -0.0
593,528 + 0.9
593,544 - 0.4
593,550 + 0.9
593,696 - 0.6
593,717 + -1.2
594,000 + 1.1