Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1155

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1154: 9522 - Hypothetical Protein, at 526597 to 527643 9522 mRNA_1155: 9523 - ProSiteProfiles-CBS domain profile.-PS51371,SUPERFAMILY--SSF54631, at 528482 to 529504 9523 mRNA_1156: 9524 - Hypothetical Protein, at 530031 to 531445 9524

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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527,551 - 0.5
527,656 + 1.5
528,215 - 0.7
528,373 - 2.0
528,439 - 0.5
528,537 + -0.0
529,112 - 9523 mRNA_1155 0.62 -0.5
529,114 + 9523 mRNA_1155 0.62 0.8
529,237 + 9523 mRNA_1155 0.74 -0.9
529,411 + -3.8
529,541 + 0.0
529,544 - -0.7
529,547 + 3.4
529,547 + -1.2
529,565 + -0.2
529,661 + 0.6
529,722 + -1.0
529,854 - 1.6
529,871 + 0.5
529,874 + -1.4
529,885 + -0.6
530,004 - 0.4
530,176 - 9524 mRNA_1156 0.10 -1.1
530,183 + 9524 mRNA_1156 0.11 0.6
530,183 + 9524 mRNA_1156 0.11 0.9
530,331 - 9524 mRNA_1156 0.21 0.2
530,466 - 9524 mRNA_1156 0.31 -0.8