Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1152

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1151: 9519 - Hypothetical Protein, at 521808 to 522539 9519 mRNA_1152: 9520 - KOG0069 Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily), at 523077 to 524441 9520 mRNA_1153: 9521 - K13513 LCLAT1, AGPAT8 lysocardiolipin and lysophospholipid acyltransferase, at 524550 to 526104 9521

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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522,358 - 9519 mRNA_1151 0.75 0.2
522,516 - 0.5
522,540 + 0.4
522,615 + -0.4
522,692 - 0.3
522,695 + -1.4
522,713 - 1.2
522,849 + 0.3
522,853 - 0.4
522,861 + -0.6
522,864 - -0.0
522,866 - 0.3
522,867 - -0.3
522,867 + 1.7
522,971 - -0.3
523,449 - 9520 mRNA_1152 0.27 2.3
523,628 - 9520 mRNA_1152 0.40 0.8
523,844 + 9520 mRNA_1152 0.56 0.2
523,894 - 9520 mRNA_1152 0.60 0.3
524,045 - 9520 mRNA_1152 0.71 -2.2
524,148 - 9520 mRNA_1152 0.78 0.9
524,178 - 9520 mRNA_1152 0.81 0.7
524,639 - 0.5
524,833 + 9521 mRNA_1153 0.18 -1.0