Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1094

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1094: 9462 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 393718 to 395326 9462 mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395816 to 397150 9463

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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392,847 + 0.8
392,873 + -0.0
392,898 - -0.5
393,027 - 1.8
393,121 + 1.2
393,143 - 2.2
393,145 - 0.8
393,149 - 2.2
393,182 - -2.1
393,271 - 0.5
393,292 + 0.5
393,297 - -0.1
393,302 - 1.4
393,303 + 1.5
393,307 + 1.9
393,335 + -0.2
393,440 + 1.5
393,443 + 0.5
393,447 + 1.0
393,461 + 0.9
393,543 - -0.1
393,549 - 0.6
393,552 + -0.0
393,577 + 0.2
393,578 + 1.6
393,579 - 0.6
393,589 - -2.0
393,597 + -1.7
393,612 - 1.0
393,618 + 0.6
393,622 + -0.6
393,762 + 1.2
393,892 + 9462 mRNA_1094 0.11 0.1
394,005 + 9462 mRNA_1094 0.18 -0.2
394,036 + 9462 mRNA_1094 0.20 2.6
394,070 - 9462 mRNA_1094 0.22 0.7
394,352 - 9462 mRNA_1094 0.39 0.3
394,502 - 9462 mRNA_1094 0.49 -0.1
394,625 - 9462 mRNA_1094 0.56 -0.9
394,649 + 9462 mRNA_1094 0.58 0.7
394,788 - 9462 mRNA_1094 0.67 -0.5
395,065 + 9462 mRNA_1094 0.84 0.3
395,211 - -0.4
395,247 + 2.0
395,314 - -0.4
395,344 + 0.8
395,473 + 0.5
395,657 - 0.4
395,815 - 2.9
395,823 + 2.4
396,101 + 9463 mRNA_1095 0.21 0.8
396,114 + 9463 mRNA_1095 0.22 1.3