Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1055

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1055: 9423 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 292025 to 293259 9423

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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291,083 - 0.1
291,088 - 0.6
291,093 - 0.1
291,102 + -0.4
291,146 - -0.2
291,157 - -1.0
291,158 + -0.5
291,199 + -0.2
291,253 - 0.4
291,269 + 0.5
291,321 - -2.3
291,383 - -0.4
291,415 + 0.5
291,429 + 0.6
291,444 - -0.6
291,448 - -1.2
291,460 + -0.1
291,460 + -2.4
291,462 - -0.0
291,467 + 1.6
291,482 + 2.3
291,500 + 0.1
291,513 + 0.7
291,627 - 0.9
291,633 - -0.3
291,642 + -0.6
291,662 - 0.5
291,664 - -0.9
291,668 + -0.1
291,669 + 0.2
291,681 + 1.1
291,685 + 1.5
291,685 - -0.7
291,739 + -0.3
291,740 + -0.3
291,743 - 1.9
291,747 + -0.2
291,748 - -1.4
291,752 - -0.5
291,761 - -0.4
291,767 - -0.5
291,778 - 0.4
291,779 + 0.0
291,779 + 0.8
291,797 + 0.6
291,801 + -0.9
291,809 - 0.1
291,813 + -0.2
291,816 - 2.9
291,845 - 0.6
291,850 - 0.1
291,853 + 0.3
291,867 + 0.6
291,869 - -0.1
291,873 - -1.2
291,873 + 1.4
291,889 - -1.3
291,903 + 2.6
291,935 + 0.7
291,987 - 0.6
292,012 + 1.6
292,017 + 0.1
292,036 + 0.3
292,040 + 0.8
292,644 + 9423 mRNA_1055 0.50 0.4
292,893 + 9423 mRNA_1055 0.70 0.4
293,339 + 0.3
293,344 + 0.7
293,346 - 0.1
293,349 + -0.3
293,488 + 0.3
293,495 - -1.1
293,500 + 0.3
293,584 + 0.0
293,589 - 1.7
293,596 - -0.7
293,650 + 2.7
293,658 + -0.3
294,211 - 0.5