Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1012

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1011: 9379 - Hypothetical Protein, at 203072 to 203287 9379 mRNA_1012: 9380 - Hypothetical Protein, at 203775 to 207320 9380 mRNA_1013: 9381 - K11761 NPL6, RSC7 chromatin structure-remodeling complex protein RSC7, at 207547 to 209466 9381

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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202,834 - 1.2
202,839 - -0.2
202,858 + 0.0
202,865 + 0.4
203,032 - 1.5
203,033 + 0.1
203,035 - -1.1
203,036 + 0.4
203,101 - 9379 mRNA_1011 0.13 -0.2
203,126 - 9379 mRNA_1011 0.25 -0.4
203,131 - 9379 mRNA_1011 0.27 1.2
203,141 + 9379 mRNA_1011 0.32 -0.2
203,152 + 9379 mRNA_1011 0.37 -0.5
203,154 - 9379 mRNA_1011 0.38 1.5
203,229 - 9379 mRNA_1011 0.73 2.6
203,285 + 0.9
203,299 + 0.3
203,306 + 2.7
203,310 + -0.4
203,312 - 0.4
203,314 - 0.9
203,315 + -1.8
203,370 - 1.4
203,415 + -0.3
203,421 + 0.6
203,702 - 0.1
203,837 + -0.5
203,890 - 2.2
204,297 - 9380 mRNA_1012 0.15 0.6
204,323 - 9380 mRNA_1012 0.15 -1.4
204,582 - 9380 mRNA_1012 0.23 -1.2
204,836 + 9380 mRNA_1012 0.30 0.9
204,925 + 9380 mRNA_1012 0.32 1.4
204,955 - 9380 mRNA_1012 0.33 1.0
205,031 - 9380 mRNA_1012 0.35 0.1
205,138 + 9380 mRNA_1012 0.38 0.6
205,165 - 9380 mRNA_1012 0.39 -0.7
205,248 - 9380 mRNA_1012 0.42 2.2
205,286 - 9380 mRNA_1012 0.43 -0.2
205,294 + 9380 mRNA_1012 0.43 2.3
205,417 - 9380 mRNA_1012 0.46 1.3
205,504 + 9380 mRNA_1012 0.49 0.0
205,519 + 9380 mRNA_1012 0.49 1.1
205,678 + 9380 mRNA_1012 0.54 0.7
205,686 - 9380 mRNA_1012 0.54 0.6
205,940 - 9380 mRNA_1012 0.61 -1.8
205,942 + 9380 mRNA_1012 0.61 0.0
206,032 - 9380 mRNA_1012 0.64 0.3
206,115 + 9380 mRNA_1012 0.66 2.7
206,262 - 9380 mRNA_1012 0.70 0.3
206,368 - 9380 mRNA_1012 0.73 -1.8
206,395 - 9380 mRNA_1012 0.74 -0.8
206,533 - 9380 mRNA_1012 0.78 0.8
206,627 + 9380 mRNA_1012 0.80 0.7
206,695 - 9380 mRNA_1012 0.82 0.6
206,710 + 9380 mRNA_1012 0.83 2.4
206,997 + 0.4
207,043 - -0.5
207,134 + -0.3
207,144 - 0.5
207,179 - 0.6
207,238 + 1.2
207,244 - 0.9
207,410 - 1.9
207,457 + -0.6
208,076 - 9381 mRNA_1013 0.28 -0.2
208,158 - 9381 mRNA_1013 0.32 -1.2