Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_999

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_998: 9366 - Hypothetical Protein, at 168302 to 169013 9366 mRNA_999: 9367 - HMMPfam-PAPA-1-like conserved region-PF04795, at 169197 to 171213 9367 mRNA_1000: 9368 - BLAST glycosyltransferase 2 [Moniliophthora roreri MCA ..., at 171507 to 175243 9368

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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168,514 - 9366 mRNA_998 0.30 0.2
168,644 + 9366 mRNA_998 0.48 -0.3
168,669 - 9366 mRNA_998 0.52 1.1
169,094 - -0.2
169,254 + 0.5
169,859 - 9367 mRNA_999 0.33 -2.0
170,552 - 9367 mRNA_999 0.67 0.3
170,697 + 9367 mRNA_999 0.74 0.2
170,712 + 9367 mRNA_999 0.75 -1.2
170,853 + 9367 mRNA_999 0.82 -1.1
171,016 - -0.3
171,064 - -0.1
171,071 - 3.7
171,114 - 0.1
171,140 + 1.0
171,170 + 0.5
171,274 + 0.8
171,285 + 0.5
171,414 - -1.0
171,424 - 0.7
171,558 - 0.8
171,568 + 2.0
171,569 - -0.4
172,063 + 9368 mRNA_1000 0.15 1.7