Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_959

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_958: 9326 - K14541 DUR1 urea carboxylase / allophanate hydrolase, at 68505 to 72950 9326 mRNA_959: 9327 - Hypothetical Protein, at 73133 to 74885 9327 mRNA_960: 9328 - K20409 WDR59 WD repeat-containing protein 59, at 75504 to 80689 9328

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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72,183 - 9326 mRNA_958 0.83 -0.9
72,340 + 9326 mRNA_958 0.86 0.4
72,875 - 1.1
72,910 + 0.1
72,924 + 1.3
72,926 + 2.1
72,928 - 2.0
73,084 + -0.2
73,203 - 2.0
73,678 + 9327 mRNA_959 0.31 1.3
73,722 + 9327 mRNA_959 0.34 2.8
73,780 - 9327 mRNA_959 0.37 0.5
73,945 - 9327 mRNA_959 0.46 -0.2
73,953 + 9327 mRNA_959 0.47 1.4
73,964 + 9327 mRNA_959 0.47 0.4
74,251 + 9327 mRNA_959 0.64 0.3
74,400 - 9327 mRNA_959 0.72 -1.0
74,515 - 9327 mRNA_959 0.79 1.2
74,797 - 2.4
74,805 - 1.3
74,832 + 1.1
74,833 + 0.6
74,836 + 0.2
74,966 + 1.5
74,985 - -1.0
75,097 - 1.5
75,098 - 0.7
75,108 - -0.1
75,113 - -0.5
75,131 - -1.1
75,142 + 1.7
75,144 - -1.1
75,249 - 0.5
75,290 + 1.4
75,435 - -0.2
75,441 - 0.4
75,457 + -0.3
75,562 - 0.7
75,579 + 1.2
75,699 + 0.5
75,857 - 0.8