Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_956

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_955: 9323 - Hypothetical Protein, at 58639 to 63739 9323 mRNA_956: 9324 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 64037 to 66119 9324 mRNA_957: 9325 - K07160 K07160 UPF0271 protein, at 67059 to 67959 9325

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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63,059 + 9323 mRNA_955 0.87 -0.2
63,068 - 9323 mRNA_955 0.87 -0.7
63,206 - 9323 mRNA_955 0.90 0.8
63,260 + 0.7
63,474 + -1.6
63,856 - -0.7
64,193 + 0.2
64,227 - 2.2
64,494 + 9324 mRNA_956 0.22 -0.3
64,958 + 9324 mRNA_956 0.44 0.5
64,964 + 9324 mRNA_956 0.45 2.0
65,317 - 9324 mRNA_956 0.61 0.2
65,494 + 9324 mRNA_956 0.70 0.7
65,686 - 9324 mRNA_956 0.79 1.6
65,904 - 9324 mRNA_956 0.90 -0.2
65,921 + 1.1
65,995 - 1.0
66,238 + 2.9
66,268 + -0.9
66,282 - -1.4
66,323 + 0.8
66,333 - 2.1
66,359 - 0.8
66,367 + 2.1
66,375 - 0.2
66,382 + 2.1
66,418 - 0.2
66,676 - -0.2
66,676 + 0.3
66,693 + 0.1
66,701 - 0.5
66,812 + 1.8
66,836 + -0.3
66,842 - 0.1
66,891 + 0.1
66,892 - 1.8
66,962 - -1.0
66,972 + 0.1
67,008 + -0.4