Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_947

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_946: 9314 - Hypothetical Protein, at 38031 to 38831 9314 mRNA_947: 9315 - K00623 CHAT choline O-acetyltransferase, at 38984 to 41581 9315 mRNA_948: 9316 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 41701 to 44858 9316

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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37,984 + -1.0
37,990 + -0.3
37,993 + -0.5
37,999 + 3.4
38,002 + 0.6
38,004 + -3.4
38,004 + 2.2
38,004 + -2.4
38,006 - 2.1
38,008 + 1.0
38,026 - -0.3
38,026 - -0.8
38,052 + 0.5
38,064 + 0.6
38,101 + -0.6
38,104 + 0.3
38,150 + 9314 mRNA_946 0.15 0.7
38,193 + 9314 mRNA_946 0.20 -0.6
38,264 + 9314 mRNA_946 0.29 1.9
38,288 - 9314 mRNA_946 0.32 2.2
38,309 + 9314 mRNA_946 0.35 -0.4
38,382 + 9314 mRNA_946 0.44 -1.6
38,658 - 9314 mRNA_946 0.78 -1.5
38,735 - 9314 mRNA_946 0.88 0.1
38,844 - -1.0
39,035 - 0.1
39,224 - 0.1
39,513 + 9315 mRNA_947 0.20 1.1
39,666 + 9315 mRNA_947 0.26 -0.4
39,773 + 9315 mRNA_947 0.30 1.6
39,883 - 9315 mRNA_947 0.35 0.1
39,987 - 9315 mRNA_947 0.39 2.8
40,344 + 9315 mRNA_947 0.52 -0.2
40,411 + 9315 mRNA_947 0.55 -0.5
40,602 - 9315 mRNA_947 0.62 0.5
40,612 + 9315 mRNA_947 0.63 -1.3
41,053 - 9315 mRNA_947 0.80 1.0
41,213 + 9315 mRNA_947 0.86 0.5
41,256 - 9315 mRNA_947 0.87 -0.2
41,491 + -0.5
41,509 - -0.5
41,539 + -1.7
41,611 - 0.9
41,633 - 1.8
41,633 - -1.3
41,645 + 0.1
41,656 + 0.9
41,659 + -2.9
41,665 + 0.1
41,671 + 2.0
41,806 - -1.6
41,993 + 1.1
42,116 - 9316 mRNA_948 0.13 0.4
42,122 + 9316 mRNA_948 0.13 3.2
42,180 + 9316 mRNA_948 0.15 -1.1
42,265 + 9316 mRNA_948 0.18 -1.1
42,398 - 9316 mRNA_948 0.22 0.3
42,441 + 9316 mRNA_948 0.23 -2.3