Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_936

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_935: 9303 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 14546 to 16225 9303 mRNA_936: 9304 - K10365 CAPZB capping protein (actin filament) muscle Z-line, beta, at 16670 to 18291 9304

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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15,676 - 9303 mRNA_935 0.67 0.3
15,682 + 9303 mRNA_935 0.68 0.6
15,683 + 9303 mRNA_935 0.68 1.4
15,687 + 9303 mRNA_935 0.68 2.1
15,689 + 9303 mRNA_935 0.68 -0.5
15,813 - 9303 mRNA_935 0.75 -1.4
15,835 - 9303 mRNA_935 0.77 -0.2
15,955 - 9303 mRNA_935 0.84 1.1
16,063 - -0.0
16,110 - 1.6
16,143 + -0.2
16,233 + -0.2
16,275 - -1.6
16,309 - 1.4
16,338 - -1.5
16,448 - -0.4
16,455 + -0.2
16,457 - 0.0
16,467 + 2.0
16,473 - -1.6
16,551 + 0.1
16,603 + -0.8
16,699 + -1.0
16,699 + 2.9
16,746 + 0.3
16,801 + 1.9
17,057 + 9304 mRNA_936 0.24 -1.3
17,190 + 9304 mRNA_936 0.32 1.6
17,339 + 9304 mRNA_936 0.41 2.5
17,615 - 9304 mRNA_936 0.58 0.1
17,727 + 9304 mRNA_936 0.65 1.6
17,813 + 9304 mRNA_936 0.70 0.8
17,909 + 9304 mRNA_936 0.76 -0.0
17,959 - 9304 mRNA_936 0.79 0.4
18,343 - 1.6
18,347 + 1.7
18,349 + 0.1
18,359 + 1.7
18,361 + 0.7
18,460 - 0.7
18,486 - 1.6
18,492 - 0.1
18,511 - 1.3
18,621 - -1.7
18,621 - -0.4
18,725 - 0.6
18,735 + -0.2
18,750 - -0.7
18,765 - 0.7
18,774 - -1.4
18,779 - 1.2
18,941 + -0.1
18,954 - 1.0
19,070 + 2.5
19,188 - -0.8
19,201 - 0.4
19,220 + 0.9
19,226 + 0.3
19,228 - -0.8
19,231 + -0.5
19,240 - 0.9