Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_921

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_920: 9288 - BLAST cytochrome c heme-binding site [Moesziomyces anta..., at 2196157 to 2196942 9288 mRNA_921: 9289 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 2197080 to 2198559 9289 mRNA_922: 9290 - K06110 EXOC3, SEC6 exocyst complex component 3, at 2198886 to 2201562 9290

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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2,196,178 - 1.7
2,196,215 + -1.6
2,196,336 + 9288 mRNA_920 0.23 1.2
2,196,513 - 9288 mRNA_920 0.45 0.5
2,196,519 - 9288 mRNA_920 0.46 1.4
2,196,521 - 9288 mRNA_920 0.46 0.8
2,196,684 - 9288 mRNA_920 0.67 -0.3
2,196,824 + 9288 mRNA_920 0.85 -0.5
2,196,908 - -1.8
2,196,954 + 1.2
2,197,079 - 2.2
2,197,365 + 9289 mRNA_921 0.19 2.6
2,197,694 - 9289 mRNA_921 0.41 2.1
2,197,926 - 9289 mRNA_921 0.57 3.0
2,198,218 - 9289 mRNA_921 0.77 0.7
2,198,339 + 9289 mRNA_921 0.85 1.7
2,198,509 + 1.1
2,198,514 - 2.1
2,198,522 + 1.1
2,198,648 - -0.7
2,198,662 + 1.7
2,198,676 + 0.2
2,198,788 - 0.3
2,198,796 - 0.1
2,198,798 - 2.2
2,198,801 - 1.3
2,198,805 + 1.7
2,198,847 + 1.1
2,198,847 + 0.4
2,198,849 + -0.1
2,198,851 - 0.3