Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_901

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_900: 9268 - SUPERFAMILY--SSF52266, at 2146982 to 2149051 9268 mRNA_901: 9269 - SUPERFAMILY--SSF52266, at 2149228 to 2151284 9269 mRNA_902: 9270 - KOG2398 Predicted proline-serine-threonine phosphatase-interacting protein (PSTPIP), at 2151634 to 2155672 9270

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
2,148,254 - 9268 mRNA_900 0.61 2.4
2,148,524 - 9268 mRNA_900 0.74 1.0
2,148,549 - 9268 mRNA_900 0.76 1.2
2,148,673 + 9268 mRNA_900 0.82 0.4
2,148,676 - 9268 mRNA_900 0.82 0.6
2,148,687 - 9268 mRNA_900 0.82 1.6
2,148,843 + 9268 mRNA_900 0.90 -0.5
2,148,981 - 0.0
2,149,000 + 0.3
2,149,025 + -1.9
2,149,131 + -0.1
2,149,134 - 0.9
2,149,143 + 0.5
2,149,147 + -0.5
2,149,148 - 2.0
2,149,152 + 2.3
2,149,189 - 0.3
2,149,191 + 1.5
2,149,198 + 0.1
2,149,208 - 1.2
2,149,269 + 1.3
2,149,272 + 0.5
2,149,301 - 0.2
2,149,301 - -1.3
2,149,305 - 0.7
2,149,313 + 0.7
2,149,390 - -1.2
2,149,429 + 0.7
2,149,442 - 9269 mRNA_901 0.10 2.3
2,149,638 + 9269 mRNA_901 0.20 -0.5
2,149,715 - 9269 mRNA_901 0.24 3.0
2,149,894 + 9269 mRNA_901 0.32 1.8
2,149,927 - 9269 mRNA_901 0.34 -0.8
2,150,050 + 9269 mRNA_901 0.40 0.1
2,150,192 - 9269 mRNA_901 0.47 3.3
2,150,268 - 9269 mRNA_901 0.51 0.8
2,150,297 - 9269 mRNA_901 0.52 1.3
2,150,315 + 9269 mRNA_901 0.53 0.4
2,150,315 + 9269 mRNA_901 0.53 2.0
2,150,315 - 9269 mRNA_901 0.53 0.3
2,150,325 + 9269 mRNA_901 0.53 -1.6
2,150,339 + 9269 mRNA_901 0.54 -0.1
2,150,349 + 9269 mRNA_901 0.54 2.1
2,150,349 - 9269 mRNA_901 0.54 -1.9
2,150,540 + 9269 mRNA_901 0.64 1.6
2,150,894 + 9269 mRNA_901 0.81 0.1
2,151,015 - 9269 mRNA_901 0.87 1.6
2,151,022 - 9269 mRNA_901 0.87 0.0
2,151,040 - 9269 mRNA_901 0.88 2.0
2,151,079 - -0.3
2,151,331 - 0.3
2,151,345 + -0.4
2,151,356 - 0.1
2,151,374 - 0.0
2,151,404 - 1.8
2,151,415 + 1.2
2,151,445 - -2.2
2,151,525 + 0.0
2,151,620 - 0.5
2,151,627 + 0.6
2,151,799 - -0.3
2,151,811 + -1.2
2,151,812 + -0.4
2,151,857 + -0.1
2,151,978 - 0.6
2,152,007 - 1.8
2,152,081 + 9270 mRNA_902 0.11 -1.4