Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_864

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_863: 9231 - K11254 H4 histone H4, at 2067725 to 2068182 9231 mRNA_864: 9232 - K11253 H3 histone H3, at 2068568 to 2069276 9232 mRNA_865: 9233 - Hypothetical Protein, at 2069621 to 2070853 9233

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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2,067,595 + 0.6
2,067,598 + -0.0
2,067,642 + 0.3
2,067,666 - -0.3
2,067,719 + 2.9
2,067,839 - 9231 mRNA_863 0.25 -0.4
2,067,850 + 9231 mRNA_863 0.27 0.9
2,067,966 - 9231 mRNA_863 0.53 0.4
2,068,003 - 9231 mRNA_863 0.61 0.4
2,068,060 + 9231 mRNA_863 0.73 0.4
2,068,144 - 1.6
2,068,218 + 1.7
2,068,258 - 0.5
2,068,262 + 2.1
2,068,283 + 3.6
2,068,298 + 0.2
2,068,298 + 0.4
2,068,299 + -0.9
2,068,324 + 2.1
2,068,331 - -1.1
2,068,332 - 1.8
2,068,336 - -0.2
2,068,341 - -1.1
2,068,346 + 0.3
2,068,349 + -0.0
2,068,359 + 0.5
2,068,392 + 0.1
2,068,396 - 1.0
2,068,399 + 2.6
2,068,399 + 0.6
2,068,417 + -1.3
2,068,423 + 2.2
2,068,445 - -1.2
2,068,446 + -0.8
2,068,449 + 2.8
2,068,452 - 0.5
2,068,456 - 0.2
2,068,463 + -0.2
2,068,467 + 0.3
2,068,477 - -2.6
2,068,610 + -0.9
2,068,611 - 2.7
2,068,965 - 9232 mRNA_864 0.56 -0.7
2,069,331 - -1.0
2,069,343 + -0.0
2,069,345 - 0.9
2,069,505 + 1.9
2,069,509 - -0.4
2,069,749 + 9233 mRNA_865 0.10 2.4
2,069,917 - 9233 mRNA_865 0.24 1.7
2,070,197 + 9233 mRNA_865 0.47 3.7