Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_802

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_801: 9169 - SUPERFAMILY--SSF52047, at 1905465 to 1906798 9169 mRNA_802: 9170 - SUPERFAMILY--SSF52047, at 1907312 to 1908570 9170 mRNA_803: 9171 - HMMPfam-Velvet factor-PF11754, at 1908961 to 1910410 9171

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,906,327 - 9169 mRNA_801 0.65 -0.2
1,906,610 - 9169 mRNA_801 0.86 1.2
1,906,761 + 0.4
1,906,810 + -0.0
1,906,894 - -0.6
1,906,895 + 0.0
1,906,911 - 1.7
1,907,185 + -1.2
1,907,186 - 2.7
1,907,217 + 0.6
1,907,224 + 2.1
1,907,320 - 1.1
1,907,326 - 0.6
1,907,329 - 1.3
1,907,399 - 0.5
1,908,217 - 9170 mRNA_802 0.72 1.6
1,909,528 - 9171 mRNA_803 0.39 -0.2