Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_770

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_769: 9137 - K08141 MAL MFS transporter, SP family, general alpha glucoside-H+ symporter, at 1832128 to 1834944 9137 mRNA_770: 9138 - K10765 ALKBH1 alkylated DNA repair protein alkB homolog 1, at 1835297 to 1836834 9138 mRNA_771: 9139 - KOG0254 Predicted transporter (major facilitator superfamily), at 1837244 to 1837694 9139 mRNA_772: 9140 - Hypothetical Protein, at 1837682 to 1837975 9140

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
1,834,398 + 9137 mRNA_769 0.81 0.2
1,834,704 + 1.7
1,834,794 + 0.4
1,834,988 - 0.5
1,835,187 + 0.0
1,835,187 + -0.3
1,835,419 + 1.1
1,835,567 + 9138 mRNA_770 0.18 3.1
1,835,593 + 9138 mRNA_770 0.19 0.4
1,835,847 + 9138 mRNA_770 0.36 0.7
1,835,989 + 9138 mRNA_770 0.45 -0.5
1,836,000 - 9138 mRNA_770 0.46 0.6
1,836,006 + 9138 mRNA_770 0.46 -0.5
1,836,104 - 9138 mRNA_770 0.52 1.3
1,836,471 + 9138 mRNA_770 0.76 1.6
1,836,877 - -0.4
1,836,900 - 1.1
1,837,037 - -0.2
1,837,612 - 9139 mRNA_771 0.82 1.1