Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_769

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_768: 9136 - Hypothetical Protein, at 1831293 to 1832129 9136 mRNA_769: 9137 - K08141 MAL MFS transporter, SP family, general alpha glucoside-H+ symporter, at 1832128 to 1834944 9137 mRNA_770: 9138 - K10765 ALKBH1 alkylated DNA repair protein alkB homolog 1, at 1835297 to 1836834 9138

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
1,831,129 - 1.3
1,831,147 + -0.7
1,831,163 + -0.8
1,831,216 + -2.5
1,831,231 - 1.1
1,831,240 + -0.6
1,831,254 + -1.3
1,831,258 - -0.1
1,831,279 - 0.2
1,831,281 + -0.3
1,831,281 - -0.4
1,831,328 + -0.1
1,831,328 + 2.1
1,831,372 - 2.8
1,831,374 - 0.1
1,831,381 - 9136 mRNA_768 0.11 -1.0
1,831,383 - 9136 mRNA_768 0.11 0.3
1,831,385 - 9136 mRNA_768 0.11 2.0
1,831,415 + 9136 mRNA_768 0.15 0.6
1,831,417 - 9136 mRNA_768 0.15 0.6
1,831,443 + 9136 mRNA_768 0.18 1.9
1,831,445 + 9136 mRNA_768 0.18 -0.7
1,831,447 + 9136 mRNA_768 0.18 -0.8
1,831,462 + 9136 mRNA_768 0.20 1.7
1,831,489 - 9136 mRNA_768 0.23 0.8
1,831,490 + 9136 mRNA_768 0.24 0.5
1,831,504 + 9136 mRNA_768 0.25 -1.1
1,831,510 - 9136 mRNA_768 0.26 0.7
1,831,513 - 9136 mRNA_768 0.26 -0.9
1,831,527 - 9136 mRNA_768 0.28 -1.2
1,831,531 + 9136 mRNA_768 0.28 2.3
1,831,552 + 9136 mRNA_768 0.31 1.5
1,831,565 + 9136 mRNA_768 0.32 -0.2
1,831,566 + 9136 mRNA_768 0.33 0.9
1,831,584 - 9136 mRNA_768 0.35 -0.1
1,831,593 - 9136 mRNA_768 0.36 -1.2
1,831,600 + 9136 mRNA_768 0.37 -2.6
1,831,620 - 9136 mRNA_768 0.39 -0.2
1,831,626 + 9136 mRNA_768 0.40 1.3
1,831,637 + 9136 mRNA_768 0.41 1.8
1,831,656 + 9136 mRNA_768 0.43 -0.0
1,831,733 + 9136 mRNA_768 0.53 -0.1
1,831,757 - 9136 mRNA_768 0.55 -1.4
1,831,757 + 9136 mRNA_768 0.55 1.4
1,831,776 + 9136 mRNA_768 0.58 3.3
1,831,802 + 9136 mRNA_768 0.61 0.4
1,831,840 + 9136 mRNA_768 0.65 -0.3
1,831,843 - 9136 mRNA_768 0.66 1.2
1,831,850 - 9136 mRNA_768 0.67 -0.6
1,831,869 + 9136 mRNA_768 0.69 -1.3
1,831,873 + 9136 mRNA_768 0.69 1.9
1,831,882 - 9136 mRNA_768 0.70 1.3
1,831,886 + 9136 mRNA_768 0.71 0.1
1,831,897 + 9136 mRNA_768 0.72 -1.3
1,831,912 - 9136 mRNA_768 0.74 1.6
1,831,923 + 9136 mRNA_768 0.75 0.9
1,831,927 + 9136 mRNA_768 0.76 0.3
1,831,992 - 9136 mRNA_768 0.84 3.0
1,832,167 + 1.0
1,832,293 + 0.0
1,832,326 - -1.9
1,832,467 - 9137 mRNA_769 0.12 -0.8
1,832,480 + 9137 mRNA_769 0.12 0.6
1,832,486 + 9137 mRNA_769 0.13 0.4
1,832,768 + 9137 mRNA_769 0.23 -1.2
1,832,962 + 9137 mRNA_769 0.30 0.4
1,833,049 + 9137 mRNA_769 0.33 -0.5
1,833,147 + 9137 mRNA_769 0.36 -1.3
1,833,509 - 9137 mRNA_769 0.49 -0.1
1,833,642 - 9137 mRNA_769 0.54 1.7
1,833,664 + 9137 mRNA_769 0.55 0.6
1,833,839 - 9137 mRNA_769 0.61 0.4
1,834,074 - 9137 mRNA_769 0.69 1.0
1,834,398 + 9137 mRNA_769 0.81 0.2
1,834,704 + 1.7
1,834,794 + 0.4
1,834,988 - 0.5
1,835,187 + 0.0
1,835,187 + -0.3
1,835,419 + 1.1
1,835,567 + 9138 mRNA_770 0.18 3.1
1,835,593 + 9138 mRNA_770 0.19 0.4
1,835,847 + 9138 mRNA_770 0.36 0.7