Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_761

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_760: 9128 - Interpro UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase, at 1815773 to 1818752 9128 mRNA_761: 9129 - KOG2919 Guanine nucleotide-binding protein, at 1818888 to 1820583 9129 mRNA_762: 9130 - K11090 LA, SSB lupus La protein, at 1820887 to 1822873 9130

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,818,112 + 9128 mRNA_760 0.78 1.4
1,818,194 + 9128 mRNA_760 0.81 0.5
1,818,598 - -0.3
1,818,641 - 0.1
1,818,727 - -0.3
1,818,743 + -0.8
1,819,152 - 9129 mRNA_761 0.16 -0.1
1,819,245 - 9129 mRNA_761 0.21 -1.2
1,819,256 - 9129 mRNA_761 0.22 0.9
1,819,597 - 9129 mRNA_761 0.42 1.8
1,819,891 - 9129 mRNA_761 0.59 0.3
1,820,028 + 9129 mRNA_761 0.67 1.0
1,820,039 - 9129 mRNA_761 0.68 -0.7
1,820,192 - 9129 mRNA_761 0.77 -0.0
1,820,618 + -0.0
1,820,634 + 0.2
1,820,657 + -0.8
1,820,677 - -1.1
1,820,772 - 1.0
1,820,783 + -0.8
1,820,794 + 0.7
1,820,799 - 0.6
1,820,814 + 0.1