Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_760

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_759: 9127 - K08486 STX1B_2_3 syntaxin 1B/2/3, at 1813341 to 1815378 9127 mRNA_760: 9128 - Interpro UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase UDP-glucose-Glycoprotein Glucosyltransferase, at 1815773 to 1818752 9128 mRNA_761: 9129 - KOG2919 Guanine nucleotide-binding protein, at 1818888 to 1820583 9129

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,815,456 + 0.9
1,815,715 - 0.7
1,815,724 + 0.9
1,815,732 + 2.3
1,815,735 + 0.6
1,815,735 - 1.6
1,815,762 - 1.8
1,815,783 + 0.7
1,815,791 + -0.2
1,815,896 + 2.0
1,815,922 + 1.6
1,816,118 + 9128 mRNA_760 0.12 0.3
1,816,416 + 9128 mRNA_760 0.22 -0.4
1,816,641 - 9128 mRNA_760 0.29 2.8
1,816,646 - 9128 mRNA_760 0.29 -0.6
1,816,655 - 9128 mRNA_760 0.30 -2.3
1,816,770 - 9128 mRNA_760 0.33 2.6
1,817,072 + 9128 mRNA_760 0.44 1.6
1,817,072 + 9128 mRNA_760 0.44 3.6
1,817,297 + 9128 mRNA_760 0.51 -1.3
1,817,447 - 9128 mRNA_760 0.56 1.8
1,817,667 + 9128 mRNA_760 0.64 0.3
1,818,112 + 9128 mRNA_760 0.78 1.4
1,818,194 + 9128 mRNA_760 0.81 0.5
1,818,598 - -0.3
1,818,641 - 0.1
1,818,727 - -0.3
1,818,743 + -0.8
1,819,152 - 9129 mRNA_761 0.16 -0.1
1,819,245 - 9129 mRNA_761 0.21 -1.2
1,819,256 - 9129 mRNA_761 0.22 0.9
1,819,597 - 9129 mRNA_761 0.42 1.8