Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_748

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_747: 9115 - K02737 PSMB5 20S proteasome subunit beta 5, at 1784917 to 1786577 9115 mRNA_748: 9116 - Hypothetical Protein, at 1787526 to 1789386 9116 mRNA_749: 9117 - Hypothetical Protein, at 1789709 to 1790560 9117

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,786,697 + 0.9
1,786,700 + 0.2
1,786,700 + 0.8
1,786,709 + 0.6
1,786,881 + -0.3
1,787,445 - -0.5
1,787,566 + 1.3
1,787,569 - -0.4
1,787,601 - -0.4
1,787,712 - 9116 mRNA_748 0.10 1.0
1,787,733 - 9116 mRNA_748 0.11 0.2
1,787,833 + 9116 mRNA_748 0.16 0.0
1,787,836 - 9116 mRNA_748 0.17 0.6
1,787,874 - 9116 mRNA_748 0.19 -1.3
1,787,936 + 9116 mRNA_748 0.22 -1.8
1,788,014 + 9116 mRNA_748 0.26 -0.3
1,788,628 - 9116 mRNA_748 0.59 0.2
1,788,917 + 9116 mRNA_748 0.75 1.3
1,789,471 + 1.6
1,789,522 + 1.3
1,789,598 - 3.2
1,789,635 - 1.4
1,789,637 + 0.2
1,789,647 - -0.2
1,789,823 + 9117 mRNA_749 0.13 1.3