Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_728

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_727: 9095 - HMMPfam-Peroxidase, family 2-PF01328,ProSiteProfiles-Heme haloperoxidase family profile.-PS51405,SUPERFAMILY--SSF47571, at 1729810 to 1731316 9095 mRNA_728: 9096 - K18669 DYRK2_3_4 dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4, at 1731599 to 1733273 9096 mRNA_729: 9097 - BLAST CMGC/DYRK/DYRK2 protein kinase [Microbotryum lychnidi..., at 1733800 to 1738518 9097

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
1,730,692 + 9095 mRNA_727 0.59 -1.6
1,730,803 + 9095 mRNA_727 0.66 -0.6
1,730,821 - 9095 mRNA_727 0.67 0.2
1,731,284 - 0.6
1,731,290 + -0.8
1,731,695 + 1.2
1,731,956 + 9096 mRNA_728 0.21 -1.0
1,732,043 + 9096 mRNA_728 0.27 0.1
1,732,143 - 9096 mRNA_728 0.32 2.5
1,732,145 - 9096 mRNA_728 0.33 0.2
1,732,458 + 9096 mRNA_728 0.51 0.4
1,732,551 + 9096 mRNA_728 0.57 0.6
1,732,671 - 9096 mRNA_728 0.64 -0.7
1,732,711 + 9096 mRNA_728 0.66 0.6
1,732,832 + 9096 mRNA_728 0.74 0.4
1,732,894 - 9096 mRNA_728 0.77 0.1
1,733,126 - 0.3
1,733,143 - -0.1
1,733,201 - 2.1
1,733,203 + 0.5
1,733,242 - 0.7
1,733,253 + 0.0
1,733,465 + 0.3
1,733,573 + 0.6
1,733,622 - 0.3
1,733,872 + -0.7
1,734,220 - 1.2