Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_727

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_726: 9094 - HMMPfam-Ferritin-like domain-PF13668, at 1727840 to 1729202 9094 mRNA_727: 9095 - HMMPfam-Peroxidase, family 2-PF01328,ProSiteProfiles-Heme haloperoxidase family profile.-PS51405,SUPERFAMILY--SSF47571, at 1729810 to 1731316 9095 mRNA_728: 9096 - K18669 DYRK2_3_4 dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4, at 1731599 to 1733273 9096

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,729,336 + 1.8
1,729,581 - 1.3
1,729,743 + 0.1
1,729,754 + 0.5
1,730,301 + 9095 mRNA_727 0.33 0.6
1,730,692 + 9095 mRNA_727 0.59 -1.6
1,730,803 + 9095 mRNA_727 0.66 -0.6
1,730,821 - 9095 mRNA_727 0.67 0.2
1,731,284 - 0.6
1,731,290 + -0.8
1,731,695 + 1.2
1,731,956 + 9096 mRNA_728 0.21 -1.0
1,732,043 + 9096 mRNA_728 0.27 0.1
1,732,143 - 9096 mRNA_728 0.32 2.5
1,732,145 - 9096 mRNA_728 0.33 0.2