Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_726

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_725: 9093 - KOG2702 Predicted panthothenate kinase/uridine kinase-related protein, at 1725841 to 1726998 9093 mRNA_726: 9094 - HMMPfam-Ferritin-like domain-PF13668, at 1727840 to 1729202 9094 mRNA_727: 9095 - HMMPfam-Peroxidase, family 2-PF01328,ProSiteProfiles-Heme haloperoxidase family profile.-PS51405,SUPERFAMILY--SSF47571, at 1729810 to 1731316 9095

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,726,928 + 0.4
1,726,936 - -1.1
1,726,952 + 0.8
1,727,060 - 0.3
1,727,063 - -0.2
1,727,064 - -2.2
1,727,075 + 2.3
1,727,077 - 1.7
1,727,078 - -1.3
1,727,207 - 0.5
1,727,645 + 0.5
1,727,648 - 0.6
1,727,659 + 2.0
1,728,077 + 9094 mRNA_726 0.17 1.7
1,728,257 - 9094 mRNA_726 0.31 0.9
1,728,555 - 9094 mRNA_726 0.52 -1.7
1,729,336 + 1.8
1,729,581 - 1.3
1,729,743 + 0.1
1,729,754 + 0.5