Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_714

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_713: 9081 - Hypothetical Protein, at 1704388 to 1704930 9081 mRNA_714: 9082 - KOG1201 Hydroxysteroid 17-beta dehydrogenase 11, at 1705056 to 1706530 9082 mRNA_715: 9083 - KOG2893 Zn finger protein, at 1706886 to 1708484 9083

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,704,249 - -1.9
1,704,278 + -0.1
1,704,309 - 2.2
1,704,428 + 0.5
1,704,589 + 9081 mRNA_713 0.37 0.6
1,704,589 - 9081 mRNA_713 0.37 2.0
1,704,692 - 9081 mRNA_713 0.56 0.0
1,704,818 + 9081 mRNA_713 0.79 1.8
1,705,124 - -0.7
1,705,129 - 1.8
1,705,172 + 0.1
1,705,280 + 9082 mRNA_714 0.15 -0.6
1,705,283 + 9082 mRNA_714 0.15 1.4
1,705,575 - 9082 mRNA_714 0.35 1.0
1,705,591 + 9082 mRNA_714 0.36 -1.1
1,705,605 - 9082 mRNA_714 0.37 0.5
1,705,788 + 9082 mRNA_714 0.50 -0.4
1,706,012 + 9082 mRNA_714 0.65 -2.7
1,706,015 - 9082 mRNA_714 0.65 0.1
1,706,143 + 9082 mRNA_714 0.74 1.1
1,706,177 + 9082 mRNA_714 0.76 1.9
1,706,454 - 1.3
1,706,594 - 1.3
1,706,639 - 0.4
1,706,769 + -0.8
1,706,864 - 1.0
1,706,872 - 1.3
1,707,085 - 9083 mRNA_715 0.12 -0.4
1,707,181 + 9083 mRNA_715 0.18 0.9
1,707,363 + 9083 mRNA_715 0.30 0.6