Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_692

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_691: 9059 - BLAST gliotoxin biosynthesis protein GliK [Marssonina b..., at 1654187 to 1655230 9059 mRNA_692: 9060 - K04459 DUSP, MKP dual specificity MAP kinase phosphatase, at 1655871 to 1659034 9060 mRNA_693: 9061 - Hypothetical Protein, at 1659255 to 1659647 9061 mRNA_694: 9062 - Hypothetical Protein, at 1659666 to 1660992 9062

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,655,038 + 9059 mRNA_691 0.82 1.1
1,655,039 + 9059 mRNA_691 0.82 1.2
1,655,451 - 3.5
1,655,475 + 0.1
1,655,475 + 2.6
1,655,507 + -0.4
1,655,522 - 2.2
1,655,640 + 0.8
1,655,646 - -0.1
1,655,779 - 2.5
1,655,791 - 0.5
1,655,811 + 0.7
1,655,937 - 0.4
1,655,982 - 2.0
1,656,123 + -0.5
1,656,399 - 9060 mRNA_692 0.17 -0.1
1,656,713 - 9060 mRNA_692 0.27 2.8
1,657,496 + 9060 mRNA_692 0.51 -0.5
1,657,581 - 9060 mRNA_692 0.54 0.0
1,657,667 - 9060 mRNA_692 0.57 0.0
1,657,697 - 9060 mRNA_692 0.58 -2.5
1,658,026 - 9060 mRNA_692 0.68 1.1
1,658,755 - -1.7
1,659,190 + 1.4
1,659,354 - 9061 mRNA_693 0.25 0.9
1,659,496 - 9061 mRNA_693 0.61 -3.8
1,659,810 + 9062 mRNA_694 0.11 1.8
1,659,813 - 9062 mRNA_694 0.11 0.7