Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_682

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_681: 9049 - K00987 CEG1 mRNA guanylyltransferase, at 1633843 to 1636121 9049 mRNA_682: 9050 - K01487 E3.5.4.3, guaD guanine deaminase, at 1636253 to 1638256 9050 mRNA_683: 9051 - K01613 psd, PISD phosphatidylserine decarboxylase, at 1638810 to 1640262 9051

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,636,281 + -0.1
1,636,558 - 9050 mRNA_682 0.15 -0.9
1,636,562 + 9050 mRNA_682 0.15 2.9
1,636,713 + 9050 mRNA_682 0.23 -0.9
1,636,937 + 9050 mRNA_682 0.34 0.2
1,637,169 + 9050 mRNA_682 0.46 -0.2
1,637,284 + 9050 mRNA_682 0.51 -0.3
1,637,573 - 9050 mRNA_682 0.66 -0.1
1,637,758 - 9050 mRNA_682 0.75 -0.6
1,637,906 + 9050 mRNA_682 0.82 -0.6
1,638,147 - 0.9
1,638,152 + -0.6
1,638,185 - -0.1
1,638,191 + 3.4
1,638,311 - -0.8
1,638,314 - -0.0
1,638,319 - 0.3
1,638,320 - 0.7
1,638,321 + 1.1
1,638,328 + 0.4
1,638,331 - 1.1
1,638,347 - -0.9
1,638,358 + 0.7
1,638,358 - 2.1
1,638,375 + 0.7
1,638,458 - 0.5
1,638,481 - -0.7
1,638,496 + 0.1
1,638,642 - -0.0
1,638,659 + -0.7
1,638,818 + 1.9
1,639,101 - 9051 mRNA_683 0.20 -1.5