Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_650

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_649: 9017 - K15192 BTAF1, MOT1 TATA-binding protein-associated factor, at 1558936 to 1565576 9017 mRNA_650: 9018 - KOG0603 Ribosomal protein S6 kinase, at 1565768 to 1568049 9018 mRNA_651: 9019 - Hypothetical Protein, at 1568205 to 1569102 9019

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,565,862 + 3.3
1,565,931 - -1.1
1,566,164 + 9018 mRNA_650 0.17 0.2
1,566,169 + 9018 mRNA_650 0.18 -1.3
1,566,640 + 9018 mRNA_650 0.38 3.9
1,566,640 + 9018 mRNA_650 0.38 0.6
1,566,916 + 9018 mRNA_650 0.50 0.6
1,567,348 + 9018 mRNA_650 0.69 1.1
1,567,348 + 9018 mRNA_650 0.69 -0.8
1,567,350 - 9018 mRNA_650 0.69 1.4
1,567,476 - 9018 mRNA_650 0.75 0.3
1,567,641 - 9018 mRNA_650 0.82 -0.5
1,567,817 - 9018 mRNA_650 0.90 -0.7
1,568,262 + -0.1
1,568,435 - 9019 mRNA_651 0.26 -1.0