Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_636

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_635: 9003 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 1526583 to 1528432 9003 mRNA_636: 9004 - Hypothetical Protein, at 1528555 to 1529690 9004 mRNA_637: 9005 - K02516 PRMT5, HSL7 type II protein arginine methyltransferase, at 1529799 to 1532897 9005

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,527,950 + 9003 mRNA_635 0.74 -1.7
1,528,088 - 9003 mRNA_635 0.81 1.6
1,528,358 + 0.4
1,528,367 + -0.9
1,528,368 + -1.5
1,528,481 - -0.2
1,528,492 + 0.6
1,528,498 - 0.1
1,528,502 + -0.3
1,528,517 + 0.2
1,528,643 + 0.5
1,528,779 - 9004 mRNA_636 0.20 -0.4
1,528,782 - 9004 mRNA_636 0.20 0.4
1,528,807 + 9004 mRNA_636 0.22 -0.4
1,528,820 + 9004 mRNA_636 0.23 -0.3
1,528,955 - 9004 mRNA_636 0.35 -0.6
1,529,549 + 9004 mRNA_636 0.88 -1.6
1,530,063 - 1.7