Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_631

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_630: 8998 - K10088 OS9 protein OS-9, at 1511055 to 1513202 8998 mRNA_631: 8999 - Hypothetical Protein, at 1514076 to 1515222 8999

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,513,125 - 0.8
1,513,426 - 3.0
1,513,433 - 1.5
1,513,450 - 1.5
1,513,559 - 0.2
1,513,629 + -0.4
1,513,684 - 1.8
1,513,716 + -0.4
1,513,717 + -0.8
1,513,724 + -0.8
1,513,738 + -0.1
1,513,744 + 1.6
1,513,863 - 1.3
1,513,914 - 2.1
1,513,943 - 1.6
1,513,978 - 0.1
1,514,044 - 0.6
1,514,047 + 1.5
1,514,120 - -2.8
1,514,138 + 3.2
1,514,163 - -1.0
1,514,169 + 2.4
1,514,173 - -0.0
1,514,181 - -0.4
1,514,187 - -0.2
1,514,188 + 0.2
1,514,190 + -0.0
1,514,202 - 8999 mRNA_631 0.11 0.4
1,514,206 + 8999 mRNA_631 0.11 0.6
1,514,213 + 8999 mRNA_631 0.12 1.2
1,514,394 + 8999 mRNA_631 0.28 -0.2
1,514,940 - 8999 mRNA_631 0.75 1.3
1,515,105 + 8999 mRNA_631 0.90 -0.8
1,515,309 + 0.8
1,515,350 - -0.2
1,515,523 - 0.0
1,515,785 - 0.3
1,515,845 + 0.6
1,515,853 - 1.6
1,515,856 - 0.7
1,515,859 + 0.5
1,515,861 - 0.6
1,516,012 + 1.4
1,516,018 - 2.1
1,516,140 - 1.1
1,516,151 + 2.8