Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_613

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_612: 8980 - KOG3183 Predicted Zn-finger protein, at 1473090 to 1474198 8980 mRNA_613: 8981 - K10631 TOPORS E3 ubiquitin-protein ligase Topors, at 1474346 to 1477518 8981 mRNA_614: 8982 - K06875 PDCD5, TFAR19 programmed cell death protein 5, at 1477879 to 1478544 8982

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,473,394 - 8980 mRNA_612 0.27 -0.3
1,473,396 + 8980 mRNA_612 0.28 0.0
1,473,425 - 8980 mRNA_612 0.30 0.0
1,473,892 - 8980 mRNA_612 0.72 1.6
1,474,142 + 1.4
1,474,158 + 0.8
1,474,161 - 1.2
1,474,303 - -1.6
1,474,708 + 8981 mRNA_613 0.11 1.3
1,475,041 - 8981 mRNA_613 0.22 -0.4
1,477,053 + 8981 mRNA_613 0.85 1.0
1,477,300 + -0.2
1,477,635 - 2.0
1,477,747 - -0.6
1,477,748 + -0.2
1,477,761 + 1.2
1,477,920 + -1.7
1,478,475 + 8982 mRNA_614 0.89 0.4
1,478,498 + 0.3