Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_551

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_550: 8918 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 1312000 to 1313154 8918 mRNA_551: 8919 - KOG1515 Arylacetamide deacetylase, at 1313966 to 1316695 8919 mRNA_552: 8920 - KOG1761 Signal recognition particle, subunit Srp14, at 1316933 to 1317920 8920

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,313,263 - 0.1
1,313,268 + 3.3
1,313,447 + -1.1
1,313,554 + 0.2
1,313,591 + 0.6
1,313,684 + 1.7
1,313,694 - -0.6
1,313,696 + 0.7
1,313,696 + 0.6
1,313,714 + -0.2
1,313,719 + -0.0
1,313,734 + -0.6
1,313,735 - -0.2
1,313,746 + -1.1
1,313,752 + -0.3
1,313,754 + 2.2
1,313,902 + 3.5
1,314,162 - -0.2
1,314,197 - -2.2
1,314,287 + 8919 mRNA_551 0.12 1.4
1,314,464 - 8919 mRNA_551 0.18 -0.3
1,314,806 + 8919 mRNA_551 0.31 0.1
1,315,368 + 8919 mRNA_551 0.51 -0.3
1,316,538 - 1.7
1,317,082 - 8920 mRNA_552 0.15 0.8